Julian Parkhill : rechercher sur Z-Library

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1

The Impact of NOD2 Variants on Fecal Microbiota in Crohn’s Disease and Controls Without Gastrointestinal Disease

Kennedy, Nicholas A, Lamb, Christopher A, Berry, Susan H, Walker, Alan W, Mansfield, John, Parkes, Miles, Simpkins, Rachel, Tremelling, Mark, Nutland, Sarah, Parkhill, Julian, Probert, Chris, Hold, Ge

Journal:

Inflammatory Bowel Diseases

Année:

2018

Langue:

english

Fichier:

PDF, 6.71 MB

english, 2018

2

Comparative cell wall core biosynthesis in the mycolated pathogens, Mycobacterium tuberculosis and Corynebacterium diphtheriae

Lynn G Dover, Ana M Cerdeño-Tárraga, Mark J Pallen, Julian Parkhill, Gurdyal S Besra

Journal:

FEMS Microbiology Reviews

Année:

2004

Langue:

english

Fichier:

PDF, 505 KB

english, 2004

3

Microbiology in the post-genomic era

Medini, Duccio, Serruto, Davide, Parkhill, Julian, Relman, David A., Donati, Claudio, Moxon, Richard, Falkow, Stanley, Rappuoli, Rino

Journal:

Nature Reviews Microbiology

Année:

2008

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2008

4

Genome watch: Genomes beyond compare

Crossman, Lisa, Holden, Matthew, Pain, Arnab, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2004

Langue:

english

Fichier:

PDF, 105 KB

english, 2004

5

All walks of life

Nicholas R. Thomson, Ana Cerdeño-Tárraga, Lisa Crossman, Mohammed Sebaihia, Julian Parkhill

Journal:

Trends in Microbiology

Année:

2003

Langue:

english

Fichier:

PDF, 192 KB

english, 2003

6

Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

Adler, Christina J, Dobney, Keith, Weyrich, Laura S, Kaidonis, John, Walker, Alan W, Haak, Wolfgang, Bradshaw, Corey J A, Townsend, Grant, Sołtysiak, Arkadiusz, Alt, Kurt W, Parkhill, Julian, Cooper,

Journal:

Nature Genetics

Année:

2013

Langue:

english

Fichier:

PDF, 638 KB

english, 2013

7

Comparative Genomic Structure of Prokaryotes

Bentley, Stephen D., Parkhill, Julian

Journal:

Annual Review of Genetics

Année:

2004

Langue:

english

Fichier:

PDF, 346 KB

english, 2004

8

Read and assembly metrics inconsequential for clinical utility of whole-genome sequencing in mapping outbreaks

Harris, Simon R, Török, M E, Cartwright, Edward J P, Quail, Michael A, Peacock, Sharon J, Parkhill, Julian

Journal:

Nature Biotechnology

Année:

2013

Langue:

english

Fichier:

PDF, 407 KB

english, 2013

9

Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans

Comas, Iñaki, Coscolla, Mireia, Luo, Tao, Borrell, Sonia, Holt, Kathryn E, Kato-Maeda, Midori, Parkhill, Julian, Malla, Bijaya, Berg, Stefan, Thwaites, Guy, Yeboah-Manu, Dorothy, Bothamley, Graham, Me

Journal:

Nature Genetics

Année:

2013

Langue:

english

Fichier:

PDF, 1.21 MB

english, 2013

10

Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

Wong, Vanessa K, Baker, Stephen, Pickard, Derek J, Parkhill, Julian, Page, Andrew J, Feasey, Nicholas A, Kingsley, Robert A, Thomson, Nicholas R, Keane, Jacqueline A, Weill, François-Xavier, Edwards,

Journal:

Nature Genetics

Année:

2015

Langue:

english

Fichier:

PDF, 2.11 MB

english, 2015

11

Essential roles of methionine and S -adenosylmethionine in the autarkic lifestyle of Mycobacterium tuberculosis

Berney, Michael, Berney-Meyer, Linda, Wong, Ka-Wing, Chen, Bing, Chen, Mei, Kim, John, Wang, Jingxin, Harris, David, Parkhill, Julian, Chan, John, Wang, Feng, Jacobs, William R.

Journal:

Proceedings of the National Academy of Sciences

Année:

2015

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2015

12

Complete Whole-Genome Sequence of Salmonella enterica subsp. enterica Serovar Java NCTC5706

Fazal, Mohammed-Abbas, Alexander, Sarah, Burnett, Edward, Deheer-Graham, Ana, Oliver, Karen, Holroyd, Nancy, Parkhill, Julian, Russell, Julie E.

Journal:

Genome Announcements

Année:

2016

Langue:

english

Fichier:

PDF, 141 KB

english, 2016

13

Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification

Wagner, Josef, Coupland, Paul, Browne, Hilary P., Lawley, Trevor D., Francis, Suzanna C., Parkhill, Julian

Journal:

BMC Microbiology

Année:

2016

Langue:

english

Fichier:

PDF, 1.80 MB

english, 2016

14

Comparative Genomics of Bacillus thuringiensis Reveals a Path to Specialized Exploitation of Multiple Invertebrate Hosts

Zheng, Jinshui, Gao, Qiuling, Liu, Linlin, Liu, Hualin, Wang, Yueying, Peng, Donghai, Ruan, Lifang, Raymond, Ben, Sun, Ming, Parkhill, Julian

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 4.13 MB

english, 2017

15

Methicillin-resistant Staphylococcus aureus emerged long before the introduction of methicillin into clinical practice

Harkins, Catriona P., Pichon, Bruno, Doumith, Michel, Parkhill, Julian, Westh, Henrik, Tomasz, Alexander, de Lencastre, Herminia, Bentley, Stephen D., Kearns, Angela M., Holden, Matthew T. G.

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1.29 MB

english, 2017

16

The Major RNA-Binding Protein ProQ Impacts Virulence Gene Expression in Salmonella enterica Serovar Typhimurium

Westermann, Alexander J., Venturini, Elisa, Sellin, Mikael E., Förstner, Konrad U., Hardt, Wolf-Dietrich, Vogel, Jörg, Parkhill, Julian

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 2.94 MB

english, 2019

17

Genome mining identifies cepacin as a plant-protective metabolite of the biopesticidal bacterium Burkholderia ambifaria

Mullins, Alex J., Murray, James A. H., Bull, Matthew J., Jenner, Matthew, Jones, Cerith, Webster, Gordon, Green, Angharad E., Neill, Daniel R., Connor, Thomas R., Parkhill, Julian, Challis, Gregory L.

Journal:

Nature Microbiology

Année:

2019

Fichier:

PDF, 2.28 MB

2019

18

Evaluation of a fully automated bioinformatics tool to predict antibiotic resistance from MRSA genomes

Kumar, Narender, Raven, Kathy E, Blane, Beth, Leek, Danielle, Brown, Nicholas M, Bragin, Eugene, Rhodes, Paul A, Parkhill, Julian, Peacock, Sharon J

Journal:

Journal of Antimicrobial Chemotherapy

Année:

2020

Langue:

english

Fichier:

PDF, 260 KB

english, 2020

19

Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions

Lees, John A., Mai, T. Tien, Galardini, Marco, Wheeler, Nicole E., Horsfield, Samuel T., Parkhill, Julian, Corander, Jukka, Ravel, Jacques

Journal:

Année:

2020

Fichier:

PDF, 1.85 MB

2020

20

Bacterial resistances to mercury and copper

Andrew P. Morby, Julian Parkhill, Barry T. O. Lee, Prof. Nigel L. Brown, Duncan A. Rouch, James Camakaris, Tracey Williams

Journal:

Journal of Cellular Biochemistry

Année:

1991

Langue:

english

Fichier:

PDF, 766 KB

english, 1991

21

Metal homeostasis in Escherichia coli: The regulation of bacterial gene expression by cupric and mercuric ions.

Nigel L. Brown, Siobhán R. Barrett, Barry T.O. Lee, Julian Parkhill, Duncan A. Rouch

Journal:

Journal of Inorganic Biochemistry

Année:

1991

Langue:

english

Fichier:

PDF, 105 KB

english, 1991

22

Induction of the mer operon of Tn501 by the MerR repressor/activator.

Julian Parkhill, Aseem Z. Ansari, Jeffrey G. Wright, Thomas V. O'Halloran, Nigel Brown

Journal:

Journal of Inorganic Biochemistry

Année:

1991

Langue:

english

Fichier:

PDF, 105 KB

english, 1991

23

‘Going wrong with confidence’: misleading sequence analyses of CiaB and ClpX

Mark Pallen, Brendan Wren, Julian Parkhill

Journal:

Molecular Microbiology

Année:

1999

Langue:

english

Fichier:

PDF, 33 KB

english, 1999

24

Identification, variation and transcription of pneumococcal repeat sequences

Nicholas J Croucher, Georgios S Vernikos, Julian Parkhill, Stephen D Bentley

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.62 MB

english, 2011

25

High-throughput bacterial SNP typing identifies distinct clusters ofSalmonellaTyphi causing typhoid in Nepalese children

Kathryn E Holt, Stephen Baker, Sabina Dongol, Buddha Basnyat, Neelam Adhikari, Stephen Thorson, Anoop S Pulickal, Yajun Song, Julian Parkhill, Jeremy J Farrar, David R Murdoch, Dominic F Kelly, Andrew

Journal:

BMC Infectious Diseases

Année:

2010

Langue:

english

Fichier:

PDF, 755 KB

english, 2010

26

Ankyrin repeat domain-encoding genes in thewPip strain ofWolbachiafrom theCulex pipiensgroup

Thomas Walker, Lisa Klasson, Mohammed Sebaihia, Mandy J Sanders, Nicholas R Thomson, Julian Parkhill, Steven P Sinkins

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 619 KB

english, 2007

27

Induction of bacterial mercury- and copper-responsive promoters: Functional differences between inducible systems and implications for their use in gene-fusions for in vivo metal biosensors

Duncan A. Rouch, Julian Parkhill, Nigel L. Brown

Journal:

Journal of Industrial Microbiology & Biotechnology

Année:

1995

Langue:

english

Fichier:

PDF, 483 KB

english, 1995

28

Tyrosine site-specific recombinases mediate DNA inversions affecting the expression of outer surface proteins of Bacteroides fragilis

Katja G. Weinacht, Hazeline Roche, Corinna M. Krinos, Michael J. Coyne, Julian Parkhill, Laurie E. Comstock

Journal:

Molecular Microbiology

Année:

2004

Langue:

english

Fichier:

PDF, 1.43 MB

english, 2004

29

Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli

Edward G. Dudley, Nicholas R. Thomson, Julian Parkhill, Nicholas P. Morin, James P. Nataro

Journal:

Molecular Microbiology

Année:

2006

Langue:

english

Fichier:

PDF, 474 KB

english, 2006

30

A novel streptococcal integrative conjugative element involved in iron acquisition

Zoe Heather, Matthew T. G. Holden, Karen F. Steward, Julian Parkhill, Lijiang Song, Gregory L. Challis, Carl Robinson, Nicholas Davis-Poynter, Andrew S. Waller

Journal:

Molecular Microbiology

Année:

2008

Langue:

english

Fichier:

PDF, 504 KB

english, 2008

31

The failure of different strains of Yersinia pestis to produce lipopolysaccharide O-antigen under different growth conditions is due to mutations in the O-antigen gene cluster

Joann L. Prior, Julian Parkhill, Paul G. Hitchen, Karen L. Mungall, Kim Stevens, Howard R. Morris, Andrew J. Reason, Petra C.F. Oyston, Anne Dell, Brendan W. Wren, Richard W. Titball

Journal:

FEMS Microbiology Letters

Année:

2001

Langue:

english

Fichier:

PDF, 214 KB

english, 2001

32

Genome sequence of Staphylococcus lugdunensis N920143 allows identification of putative colonization and virulence factors

Simon Heilbronner, Matthew T.G. Holden, Andries van Tonder, Joan A. Geoghegan, Timothy J. Foster, Julian Parkhill, Stephen D. Bentley

Journal:

FEMS Microbiology Letters

Année:

2011

Langue:

english

Fichier:

PDF, 434 KB

english, 2011

33

Restricting genome data won't stop bioterrorism

Read, Timothy D., Parkhill, Julian

Journal:

Année:

2002

Langue:

english

Fichier:

PDF, 39 KB

english, 2002

34

Genomics: Relative pathogenic values

Parkhill, Julian, Berry, Colin

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 149 KB

english, 2003

35

10.1038/75346

Parkhill, Julian

Journal:

Nature Biotechnology

Année:

2000

Langue:

english

Fichier:

PDF, 177 KB

english, 2000

36

Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities

van der Gast, Christopher J, Walker, Alan W, Stressmann, Franziska A, Rogers, Geraint B, Scott, Paul, Daniels, Thomas W, Carroll, Mary P, Parkhill, Julian, Bruce, Kenneth D

Journal:

The ISME Journal

Année:

2010

Langue:

english

Fichier:

PDF, 649 KB

english, 2010

37

Wolbachia variability and host effects on crossing type in Culex mosquitoes

Sinkins, Steven P., Walker, Thomas, Lynd, Amy R., Steven, Andrew R., Makepeace, Ben L., J. Godfray, H. Charles, Parkhill, Julian

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 305 KB

english, 2005

38

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

Holt, Kathryn E, Parkhill, Julian, Mazzoni, Camila J, Roumagnac, Philippe, Weill, François-Xavier, Goodhead, Ian, Rance, Richard, Baker, Stephen, Maskell, Duncan J, Wain, John

Journal:

Nature Genetics

Année:

2008

Langue:

english

Fichier:

PDF, 332 KB

english, 2008

39

Accelerated telomere shortening in ataxia telangiectasia

Parkhill, Julian, Campbell, Louise, Stacey, Michael, Biggs, Paul, Byrd, Philip J., Taylor, A. Malcolm R., Metcalfe, Judith A.

Journal:

Nature Genetics

Année:

1996

Fichier:

PDF, 513 KB

1996

40

The use of genome annotation data and its impact on biological conclusions

Tettelin, Hervé, Parkhill, Julian

Journal:

Nature Genetics

Année:

2004

Langue:

english

Fichier:

PDF, 69 KB

english, 2004

41

Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica

Parkhill, Julian, Sebaihia, Mohammed, Preston, Andrew, Murphy, Lee D, Thomson, Nicholas, Harris, David E, Holden, Matthew T G, Churcher, Carol M, Bentley, Stephen D, Mungall, Karen L

Journal:

Nature Genetics

Année:

2003

Langue:

english

Fichier:

PDF, 1.16 MB

english, 2003

42

Pathogens in decay

Cerdeño-Tárraga, Ana, Thomson, Nicholas, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2004

Langue:

english

Fichier:

PDF, 156 KB

english, 2004

43

Genome watch: Diversity at every level

Crossman, Lisa, Cerdeño-Tárraga, Ana, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2005

Langue:

english

Fichier:

PDF, 169 KB

english, 2005

44

Genome watch: Eukaryotes: not beyond compare

Pain, Arnab, Bentley, Stephen, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2004

Langue:

english

Fichier:

PDF, 140 KB

english, 2004

45

Genome watch: Genomic pot pourri

Bentley, Stephen, Crossman, Lisa, Cerdeño-Tárraga, Ana, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2004

Langue:

english

Fichier:

PDF, 103 KB

english, 2004

46

Genome watch: Brothers in arms

Thomson, Nicholas, Holden, Matthew, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2005

Langue:

english

Fichier:

PDF, 267 KB

english, 2005

47

Genome watch: Livelihood hazards

Sebaihia, Mohammed, Thomson, Nicholas R., Crossman, Lisa, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2005

Langue:

english

Fichier:

PDF, 181 KB

english, 2005

48

Genome watch: Comparative Apicomplexan genomics

Pain, Arnab, Crossman, Lisa, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2005

Langue:

english

Fichier:

PDF, 156 KB

english, 2005

49

Single-cell genomics

Walker, Alan, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2008

Langue:

english

Fichier:

PDF, 183 KB

english, 2008

50

Genome Watch: The value of comparison

Thomson, Nicholas, Sebaihia, Mohammed, Cerdeño-Tárraga, Ana, Bentley, Stephen, Crossman, Lisa, Parkhill, Julian

Journal:

Nature Reviews Microbiology

Année:

2003

Langue:

english

Fichier:

PDF, 113 KB

english, 2003